BioNetGen 2.2: Advances in Rule-Based Modeling
Summary: BioNetGen is an open-source software package for rule-based modeling of complex biochemical systems. Version 2.2 of the software introduces numerous new features for both model specification and simulation. Here, we report on these additions, discussing how they facilitate the construction, simulation and analysis of larger and more complex models than previously possible.
L. A. Harris and J. S. Hogg and J. Tapia and J. A. Sekar and S. Gupta and I. Korsunsky and A. Arora and D. Barua and R. P. Sheehan and J. R. Faeder, "BioNetGen 2.2: Advances in Rule-Based Modeling," Bioinformatics, vol. 32, no. 21, pp. 3366-3368, Oxford University Press, Nov 2016.
The definitive version is available at https://doi.org/10.1093/bioinformatics/btw469
Chemical and Biochemical Engineering
Keywords and Phrases
Biochemistry; Computer Language; Human; Software; Theoretical Model, Biochemistry; Humans; Models, Theoretical; Programming Languages; Software
International Standard Serial Number (ISSN)
Article - Journal
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01 Nov 2016